System crash during update, manage to fix but some icon still broke

Hello, my pc forced shutdown and locked out from booting, managed to fix it by fixing the mtree stuff using chroot, but some icons are broken (presumably gtk3?) here is the output of command that i use for fixing the mtree.

sudo LC_ALL=C pacman -Qkk | grep -v ', 0 altered files'
warning: cpupower-gui-git: /usr/share/polkit-1/rules.d (GID mismatch)
warning: cpupower-gui-git: /usr/share/polkit-1/rules.d (Permissions mismatch)
warning: cups: /etc/cups/classes.conf (Permissions mismatch)
cpupower-gui-git: 87 total files, 1 altered file
warning: cups: /etc/cups/printers.conf (Permissions mismatch)
warning: cups: /etc/cups/subscriptions.conf (Permissions mismatch)
warning: eos-qogir-icons: /usr/share/icons/Qogir/icon-theme.cache (Modification time mismatch)
warning: eos-qogir-icons: /usr/share/icons/Qogir-dark/icon-theme.cache (Modification time mismatch)
backup file: cups: /etc/cups/classes.conf (Modification time mismatch)
backup file: cups: /etc/cups/classes.conf (Size mismatch)
backup file: cups: /etc/cups/classes.conf (SHA256 checksum mismatch)
backup file: cups: /etc/cups/printers.conf (Modification time mismatch)
backup file: cups: /etc/cups/printers.conf (Size mismatch)
backup file: cups: /etc/cups/printers.conf (SHA256 checksum mismatch)
backup file: cups: /etc/cups/subscriptions.conf (Modification time mismatch)
backup file: cups: /etc/cups/subscriptions.conf (Size mismatch)
backup file: cups: /etc/cups/subscriptions.conf (SHA256 checksum mismatch)
cups: 946 total files, 3 altered files
backup file: endeavouros-mirrorlist: /etc/pacman.d/endeavouros-mirrorlist (Modification time mismatch)
backup file: endeavouros-mirrorlist: /etc/pacman.d/endeavouros-mirrorlist (Size mismatch)
backup file: endeavouros-mirrorlist: /etc/pacman.d/endeavouros-mirrorlist (SHA256 checksum mismatch)
eos-qogir-icons: 33824 total files, 2 altered files
warning: filesystem: /usr/lib/os-release (Modification time mismatch)
warning: filesystem: /usr/lib/os-release (Size mismatch)
warning: filesystem: /usr/lib/os-release (SHA256 checksum mismatch)
warning: filesystem: /usr/share/factory/etc/issue (Modification time mismatch)
warning: filesystem: /usr/share/factory/etc/issue (Size mismatch)
warning: filesystem: /usr/share/factory/etc/issue (SHA256 checksum mismatch)
backup file: filesystem: /etc/crypttab (Modification time mismatch)
backup file: filesystem: /etc/crypttab (Size mismatch)
backup file: filesystem: /etc/crypttab (SHA256 checksum mismatch)
backup file: filesystem: /etc/fstab (Modification time mismatch)
backup file: filesystem: /etc/fstab (Size mismatch)
backup file: filesystem: /etc/fstab (SHA256 checksum mismatch)
backup file: filesystem: /etc/group (Modification time mismatch)
backup file: filesystem: /etc/group (Size mismatch)
backup file: filesystem: /etc/group (SHA256 checksum mismatch)
backup file: filesystem: /etc/gshadow (Modification time mismatch)
backup file: filesystem: /etc/gshadow (Size mismatch)
backup file: filesystem: /etc/gshadow (SHA256 checksum mismatch)
backup file: filesystem: /etc/hosts (Modification time mismatch)
backup file: filesystem: /etc/hosts (Size mismatch)
backup file: filesystem: /etc/hosts (SHA256 checksum mismatch)
backup file: filesystem: /etc/issue (Modification time mismatch)
backup file: filesystem: /etc/issue (Size mismatch)
backup file: filesystem: /etc/issue (SHA256 checksum mismatch)
backup file: filesystem: /etc/nsswitch.conf (Modification time mismatch)
backup file: filesystem: /etc/nsswitch.conf (Size mismatch)
backup file: filesystem: /etc/nsswitch.conf (SHA256 checksum mismatch)
backup file: filesystem: /etc/passwd (Modification time mismatch)
backup file: filesystem: /etc/passwd (Size mismatch)
backup file: filesystem: /etc/passwd (SHA256 checksum mismatch)
backup file: filesystem: /etc/resolv.conf (Modification time mismatch)
backup file: filesystem: /etc/resolv.conf (Size mismatch)
backup file: filesystem: /etc/resolv.conf (SHA256 checksum mismatch)
backup file: filesystem: /etc/shadow (Modification time mismatch)
backup file: filesystem: /etc/shadow (Size mismatch)
backup file: filesystem: /etc/shadow (SHA256 checksum mismatch)
backup file: filesystem: /etc/shells (Modification time mismatch)
backup file: filesystem: /etc/shells (Size mismatch)
backup file: filesystem: /etc/shells (SHA256 checksum mismatch)
backup file: filesystem: /etc/subgid (Modification time mismatch)
backup file: filesystem: /etc/subgid (Size mismatch)
backup file: filesystem: /etc/subgid (SHA256 checksum mismatch)
backup file: filesystem: /etc/subuid (Modification time mismatch)
backup file: filesystem: /etc/subuid (Size mismatch)
backup file: filesystem: /etc/subuid (SHA256 checksum mismatch)
filesystem: 124 total files, 2 altered files
backup file: glibc: /etc/locale.gen (Modification time mismatch)
backup file: glibc: /etc/locale.gen (Size mismatch)
backup file: glibc: /etc/locale.gen (SHA256 checksum mismatch)
backup file: grub: /etc/default/grub (Modification time mismatch)
backup file: grub: /etc/default/grub (Size mismatch)
backup file: grub: /etc/default/grub (SHA256 checksum mismatch)
warning: java-runtime-common: /usr/lib/jvm/default (Symlink path mismatch)
warning: java-runtime-common: /usr/lib/jvm/default (Modification time mismatch)
warning: java-runtime-common: /usr/lib/jvm/default-runtime (Symlink path mismatch)
warning: java-runtime-common: /usr/lib/jvm/default-runtime (Modification time mismatch)
warning: jdownloader2: /opt/JDownloader (UID mismatch)
warning: jdownloader2: /opt/JDownloader (GID mismatch)
java-runtime-common: 21 total files, 2 altered files
jdownloader2: 59 total files, 1 altered file
warning: libutempter: /usr/lib/utempter/utempter (GID mismatch)
warning: libutempter: /usr/lib/utempter/utempter (Permissions mismatch)
libutempter: 20 total files, 1 altered file
backup file: libvirt: /etc/libvirt/nwfilter/allow-arp.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-arp.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-arp.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp-server.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp-server.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp-server.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6-server.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6-server.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6-server.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv4.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv4.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv4.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv6.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv6.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv6.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv4.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv4.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv4.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv6.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv6.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv6.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic-gateway.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic-gateway.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic-gateway.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-ip-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-ip-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-ip-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-mac-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-mac-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-mac-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-multicast.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-multicast.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-multicast.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-multicast.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-multicast.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-multicast.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-broadcast.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-broadcast.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-broadcast.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-l2-traffic.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-l2-traffic.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-l2-traffic.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-rarp-traffic.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-rarp-traffic.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-rarp-traffic.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self-rarp.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self-rarp.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self-rarp.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/qemu/networks/default.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/qemu/networks/default.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/qemu/networks/default.xml (SHA256 checksum mismatch)
warning: lsb-release: /etc/lsb-release (Modification time mismatch)
warning: lsb-release: /etc/lsb-release (Size mismatch)
warning: lsb-release: /etc/lsb-release (SHA256 checksum mismatch)
warning: nvidia: /usr/share/licenses/nvidia/LICENSE (Size mismatch)
warning: cpupower-gui-git: /usr/share/polkit-1/rules.d (GID mismatch)
warning: cpupower-gui-git: /usr/share/polkit-1/rules.d (Permissions mismatch)
warning: cups: /etc/cups/classes.conf (Permissions mismatch)
cpupower-gui-git: 87 total files, 1 altered file
warning: cups: /etc/cups/printers.conf (Permissions mismatch)
warning: cups: /etc/cups/subscriptions.conf (Permissions mismatch)
warning: eos-qogir-icons: /usr/share/icons/Qogir/icon-theme.cache (Modification time mismatch)
warning: eos-qogir-icons: /usr/share/icons/Qogir-dark/icon-theme.cache (Modification time mismatch)
backup file: cups: /etc/cups/classes.conf (Modification time mismatch)
backup file: cups: /etc/cups/classes.conf (Size mismatch)
backup file: cups: /etc/cups/classes.conf (SHA256 checksum mismatch)
backup file: cups: /etc/cups/printers.conf (Modification time mismatch)
backup file: cups: /etc/cups/printers.conf (Size mismatch)
backup file: cups: /etc/cups/printers.conf (SHA256 checksum mismatch)
backup file: cups: /etc/cups/subscriptions.conf (Modification time mismatch)
backup file: cups: /etc/cups/subscriptions.conf (Size mismatch)
backup file: cups: /etc/cups/subscriptions.conf (SHA256 checksum mismatch)
cups: 946 total files, 3 altered files
backup file: endeavouros-mirrorlist: /etc/pacman.d/endeavouros-mirrorlist (Modification time mismatch)
backup file: endeavouros-mirrorlist: /etc/pacman.d/endeavouros-mirrorlist (Size mismatch)
backup file: endeavouros-mirrorlist: /etc/pacman.d/endeavouros-mirrorlist (SHA256 checksum mismatch)
eos-qogir-icons: 33824 total files, 2 altered files
warning: filesystem: /usr/lib/os-release (Modification time mismatch)
warning: filesystem: /usr/lib/os-release (Size mismatch)
warning: filesystem: /usr/lib/os-release (SHA256 checksum mismatch)
warning: filesystem: /usr/share/factory/etc/issue (Modification time mismatch)
warning: filesystem: /usr/share/factory/etc/issue (Size mismatch)
warning: filesystem: /usr/share/factory/etc/issue (SHA256 checksum mismatch)
backup file: filesystem: /etc/crypttab (Modification time mismatch)
backup file: filesystem: /etc/crypttab (Size mismatch)
backup file: filesystem: /etc/crypttab (SHA256 checksum mismatch)
backup file: filesystem: /etc/fstab (Modification time mismatch)
backup file: filesystem: /etc/fstab (Size mismatch)
backup file: filesystem: /etc/fstab (SHA256 checksum mismatch)
backup file: filesystem: /etc/group (Modification time mismatch)
backup file: filesystem: /etc/group (Size mismatch)
backup file: filesystem: /etc/group (SHA256 checksum mismatch)
backup file: filesystem: /etc/gshadow (Modification time mismatch)
backup file: filesystem: /etc/gshadow (Size mismatch)
backup file: filesystem: /etc/gshadow (SHA256 checksum mismatch)
backup file: filesystem: /etc/hosts (Modification time mismatch)
backup file: filesystem: /etc/hosts (Size mismatch)
backup file: filesystem: /etc/hosts (SHA256 checksum mismatch)
backup file: filesystem: /etc/issue (Modification time mismatch)
backup file: filesystem: /etc/issue (Size mismatch)
backup file: filesystem: /etc/issue (SHA256 checksum mismatch)
backup file: filesystem: /etc/nsswitch.conf (Modification time mismatch)
backup file: filesystem: /etc/nsswitch.conf (Size mismatch)
backup file: filesystem: /etc/nsswitch.conf (SHA256 checksum mismatch)
backup file: filesystem: /etc/passwd (Modification time mismatch)
backup file: filesystem: /etc/passwd (Size mismatch)
backup file: filesystem: /etc/passwd (SHA256 checksum mismatch)
backup file: filesystem: /etc/resolv.conf (Modification time mismatch)
backup file: filesystem: /etc/resolv.conf (Size mismatch)
backup file: filesystem: /etc/resolv.conf (SHA256 checksum mismatch)
backup file: filesystem: /etc/shadow (Modification time mismatch)
backup file: filesystem: /etc/shadow (Size mismatch)
backup file: filesystem: /etc/shadow (SHA256 checksum mismatch)
backup file: filesystem: /etc/shells (Modification time mismatch)
backup file: filesystem: /etc/shells (Size mismatch)
backup file: filesystem: /etc/shells (SHA256 checksum mismatch)
backup file: filesystem: /etc/subgid (Modification time mismatch)
backup file: filesystem: /etc/subgid (Size mismatch)
backup file: filesystem: /etc/subgid (SHA256 checksum mismatch)
backup file: filesystem: /etc/subuid (Modification time mismatch)
backup file: filesystem: /etc/subuid (Size mismatch)
backup file: filesystem: /etc/subuid (SHA256 checksum mismatch)
filesystem: 124 total files, 2 altered files
backup file: glibc: /etc/locale.gen (Modification time mismatch)
backup file: glibc: /etc/locale.gen (Size mismatch)
backup file: glibc: /etc/locale.gen (SHA256 checksum mismatch)
backup file: grub: /etc/default/grub (Modification time mismatch)
backup file: grub: /etc/default/grub (Size mismatch)
backup file: grub: /etc/default/grub (SHA256 checksum mismatch)
warning: java-runtime-common: /usr/lib/jvm/default (Symlink path mismatch)
warning: java-runtime-common: /usr/lib/jvm/default (Modification time mismatch)
warning: java-runtime-common: /usr/lib/jvm/default-runtime (Symlink path mismatch)
warning: java-runtime-common: /usr/lib/jvm/default-runtime (Modification time mismatch)
warning: jdownloader2: /opt/JDownloader (UID mismatch)
warning: jdownloader2: /opt/JDownloader (GID mismatch)
java-runtime-common: 21 total files, 2 altered files
jdownloader2: 59 total files, 1 altered file
warning: libutempter: /usr/lib/utempter/utempter (GID mismatch)
warning: libutempter: /usr/lib/utempter/utempter (Permissions mismatch)
libutempter: 20 total files, 1 altered file
backup file: libvirt: /etc/libvirt/nwfilter/allow-arp.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-arp.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-arp.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp-server.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp-server.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp-server.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcp.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6-server.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6-server.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6-server.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-dhcpv6.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv4.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv4.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv4.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv6.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv6.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-incoming-ipv6.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv4.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv4.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv4.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv6.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv6.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/allow-ipv6.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic-gateway.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic-gateway.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic-gateway.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/clean-traffic.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-ip-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-ip-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-ip-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-mac-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-mac-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-mac-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-arp-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-multicast.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-multicast.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-multicast.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ip-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-multicast.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-multicast.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-multicast.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-ipv6-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-broadcast.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-broadcast.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-broadcast.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-spoofing.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-spoofing.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-mac-spoofing.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-l2-traffic.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-l2-traffic.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-l2-traffic.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-rarp-traffic.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-rarp-traffic.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/no-other-rarp-traffic.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self-rarp.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self-rarp.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self-rarp.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/nwfilter/qemu-announce-self.xml (SHA256 checksum mismatch)
backup file: libvirt: /etc/libvirt/qemu/networks/default.xml (Modification time mismatch)
backup file: libvirt: /etc/libvirt/qemu/networks/default.xml (Size mismatch)
backup file: libvirt: /etc/libvirt/qemu/networks/default.xml (SHA256 checksum mismatch)
warning: lsb-release: /etc/lsb-release (Modification time mismatch)
warning: lsb-release: /etc/lsb-release (Size mismatch)
warning: lsb-release: /etc/lsb-release (SHA256 checksum mismatch)
warning: nvidia: /usr/share/licenses/nvidia/LICENSE (Size mismatch)

Have you tried rebuilding your font cache?

Excluding the permissions mismatches, those all look normal.

How do i rebuild font cache?

Oops. I guess i am not awake yet.

I meant the icon cache.

If you reinstall your icon theme it will get rebuilt.

how do i do that?
btw it also affect libreoffice app where all the icon doesnt follow the theme (all light theme so the icon become one with the background)

sudo pacman -Syu eos-qogir-icons